Changeset 2347 for branches/newmole/data/readme_data.htm
- Timestamp:
- 08/22/08 12:36:27 (5 months ago)
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readme_data.htm (modified) (4 diffs)
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branches/newmole/data
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old new 16 16 Sc1_costar_z020_lb.fluxes 17 17 Sc1_costar_z004_lb.fluxes 18 atlas_fm35k2.mod 19 atlas_fm30k2.mod 20 atlas_fm25k2_odfnew.mod 21 atlas_fm25k2.mod 22 atlas_fm20k2_odfnew.mod 23 atlas_fm20k2.mod 24 atlas_fm15k2_odfnew.mod 25 atlas_fm15k2.mod 26 atlas_fm10k2_odfnew.mod 27 atlas_fm10k2.mod 28 atlas_fm05k2_odfnew.mod 29 atlas_fm05k2.mod 30 atlas_fm03k2.mod 31 atlas_fm02k2.mod 32 atlas_fm01k2.mod 33 atlas_3d_odfnew.mod 34 atlas_3d.mod 35 wmbasic.mod 36 starburst999.mod 37 starburst99.mod 38 Sc1_costar_solar.mod 39 Sc1_costar_halo.mod 40 rauch_pg1159.mod 41 rauch_hydr.mod 42 rauch_h-ni_solar.mod 43 rauch_h-ni_halo.mod 44 rauch_h-ni_3d.mod 45 rauch_helium.mod 46 rauch_h-ca_solar.mod 47 rauch_h-ca_halo.mod 48 rauch_h-ca_3d.mod 49 rauch_h+he_3d.mod 50 ostar2002_p03.mod 51 ostar2002_p00.mod 52 ostar2002_m99.mod 53 ostar2002_m30.mod 54 ostar2002_m20.mod 55 ostar2002_m17.mod 56 ostar2002_m15.mod 57 ostar2002_m10.mod 58 ostar2002_m07.mod 59 ostar2002_m03.mod 60 ostar2002_3d.mod 61 mihalas.mod 62 kwerner.mod 63 kurucz79.mod 64 bstar2006_p03.mod 65 bstar2006_p00.mod 66 bstar2006_m99.mod 67 bstar2006_m10.mod 68 bstar2006_m07.mod 69 bstar2006_m03.mod 70 bstar2006_3d.mod 71 atlas_fp10k2.mod 72 atlas_fp05k2_odfnew.mod 73 atlas_fp05k2.mod 74 atlas_fp03k2.mod 75 atlas_fp02k2_odfnew.mod 76 atlas_fp02k2.mod 77 atlas_fp01k2.mod 78 atlas_fp00k2_odfnew.mod 79 atlas_fp00k2.mod 80 atlas_fm50k2.mod 81 atlas_fm45k2.mod 82 atlas_fm40k2.mod
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branches/newmole/data/readme_data.htm
r643 r2347 12 12 <h1>Read me for Cloudy data files</h1> 13 13 <p><font size="1">last reviewed 14 <!--webbot bot="Timestamp" S-Type="EDITED" S-Format="%d-%b-%Y" startspan -->2 6-Nov-2006<!--webbot bot="Timestamp" endspan i-checksum="16154" --> </font></p>14 <!--webbot bot="Timestamp" S-Type="EDITED" S-Format="%d-%b-%Y" startspan -->28-Feb-2007<!--webbot bot="Timestamp" endspan i-checksum="15298" --> </font></p> 15 15 <hr> 16 16 <h2><a name="Overview">Overview</a></h2> 17 17 <p>This documents the data files included in the Cloudy data distribution. 18 It is meant as a reminder of the purpose of the various files and is not intended as 19 instructions for setting up the code. Those instructions are on the 18 Those instructions for setting up the code are on the 20 19 <a href="http://www.nublado.org">web site</a>.</p> 21 <p>Three types of files are present in this directory. The re are some22 input scripts (do an ls on "*.in") that are used to compile various helper files23 such as stellar atmospheres or types of grains. There are some24 user-editable files that change how the code operates. These can change25 the continuum resolution or add new entries into the main emission-line output. 26 Finally, the majority of the files are atomic/molecular data files that are27 ne eded for the code to operate.</p>20 <p>Three types of files are present in this directory. The majority of the 21 files are atomic/molecular data files that are needed for the code to operate. There are some 22 input scripts (do an <i>ls</i> on "*.in") that are used to compile various 23 helper files such as stellar atmospheres or types of grains. There are 24 also some user-editable files, with names *.ini, that change how the code 25 operates. These can, for instance, change the continuum resolution or add 26 new entries into the main emission-line output. </p> 28 27 <hr> 29 28 <h2><a name="Compiling ancillary files with the *.in input files">Compiling 30 29 ancillary files with the *.in input files</a></h2> 31 <p>Certain sets of ancillary files must be generated before the code will 32 fully function. These include the stellar atmospheres, grain data files, and 33 possibly the opacities. A series of simple input scripts are included here 34 to do this. These input scripts should be executed after Cloudy has been compiled 35 and is fully functional. The 36 following gives the script name and says what it does. </p> 37 <h3>Emergent continua from stellar atmospheres</h3> 38 <p>These need to be compiled before the Atlas, Costar, Rauch, and Werner 39 options on the <font size="3"><kbd><strong>table star</strong></kbd></font> 40 command will function. This step does not need to be done 41 if these stellar continua are not needed. The Miscellaneous Commands 42 section of Part I of Hazy explains more about this step - see the section on 43 compiling stellar atmospheres.</p> 44 <p><font size="3"><kbd><strong>compilestars.in</strong></kbd></font> - will 45 compile all the stellar atmospheres - this is the only one that need be done if 46 all atmospheres are to be used<br> 47 <font size="3"><kbd><strong>compile1star.in</strong></kbd></font> - will compile 48 only one of the stellar atmospheres (edit the file to determine which one).<br> 49 <font size="3"><kbd><strong>compileatlas.in</strong></kbd></font> - will compile 50 only the atlas stellar atmospheres<br> 51 <font size="3"><kbd><strong>compilecostar.in</strong></kbd></font> - will 52 compile only the CoStar stellar atmospheres <br> 53 <font size="3"><kbd><strong>compilerauch.in</strong></kbd></font> - compile only 54 the Rauch stellar atmospheres<br> 55 <font size="3"><kbd><strong>compilewerner.in</strong></kbd></font> - compiles 56 only the Werner stellar atmospheres</p> 30 <p>The download includes all the files you will need to get Cloudy running. 31 The download does not include the stellar continua file that are needed for the 32 table stars command to work. The web site describes how to set up these continua 33 and this only needs to be done if you want to use the table stars command. 34 Several input files (names like compile*.in) are examples of compiling some of 35 the stellar continua.</p> 57 36 <h3>(Possibly) compiling the size-distributed grains</h3> 58 <p>Compiled grain opacities must exist before the <font size="3"><kbd><strong>pgrains</strong></kbd></font> 59 command will function. Compiled opacities are already included in the data 37 <p>It is easy to create new grain tipes. Compiled opacities are already included in the data 60 38 files (the *.opc files), so nothing need be done if you are happy with the 61 39 default setup. They would need to be recompiled if you change the … … 98 76 lines and only includes prominent elements for depleted mixture. <i><b>NB</b></i> 99 77 This does not 100 add grains to the mix even though many elements are strongly depleted. This is not consistent, and so grains should be added separately.</p> 78 add grains to the mix even though many elements are strongly depleted. This is not consistent, and so grains should be added separately.<br> 79 pdr_leiden.ini and pdr_leiden_hack.ini are used to compute the PDR models given 80 in Roellig et al., </p> 101 81 <h3>FeII bands in the output</h3> 102 <p>The data file bands_Fe2.datis used to specify a series of FeII bands that are82 <p>The data file <i>bands_Fe2.dat</i> is used to specify a series of FeII bands that are 103 83 entered into the main emission line output. These bands are 104 84 described further in the dat file and in the part of Hazy where FeII is 105 85 discussed. </p> 106 86 <h3>Continuum bands in the output</h3> 107 <p>The data file bands_continuum.datis used to define a series of bands. 87 <p>The data file <i>bands_continuum.dat</i> is used to define a series of bands. 108 88 Each band has a lower and upper wavelength range and the code will integrate 109 89 over these bands and enter a total luminosity into the main emission line … … 121 101 <p>LineList_BLR.dat - lines seen in the spectra of BLR of AGN<br> 122 102 LineList_NLR.dat - lines seen in the spectra of NLR of AGN<br> 103 LineList_HII.dat - lines for HII Regions<br> 123 104 LineList_strong.dat - a minimarl list of emission lines<br> 124 105 LineList_PDR.dat - a list of PDR lines<br> 125 106 LineList_PDR_H2.dat - a PDR line list with many H<sub>2</sub> lines from the large molecule<br> 126 LineList_HeH.dat - a set of H and He emission lines</p> 107 LineList_HeH.dat - a set of H and He emission lines<br> 108 LineList_He_like.dat - lines for the He-like iso sequence</p> 127 109 <p>Some line wavelengths may change over time as the accuracy of energy levels 128 110 improve. The "table lines name.dat" command is used to check that that the … … 179 161 <h3>fe2nn.dat</h3> 180 162 <p>nn(142) - actual level numbers for each of Zhang and Pradhan levels</p> 181 <h3> fe2levels.dat</h3>182 <p>This gives the spectroscopic levels sorted in increasing order within the 183 model atom.</p>163 <h3> 164 fe2energies.dat</h3> 165 <p>This gives the energy levels in increasing order.</p> 184 166 <hr> 185 167 <h2>Molecular hydrogen files</h2>
